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    tropomyosin [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836539, updated on 18-Sep-2024

    Summary

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    Official Full Name
    tropomyosin
    Primary source
    TAIR:AT5G64180
    Locus tag
    AT5G64180
    See related
    Araport:AT5G64180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MSJ1.2; MSJ1_2
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (25677072..25678702)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene RNA methyltransferase family protein Neighboring gene ncRNA Neighboring gene plant/protein Neighboring gene dentin sialophosphoprotein-like protein Neighboring gene neuronal PAS domain protein Neighboring gene serine/arginine-rich splicing factor-like protein, putative Neighboring gene alternative oxidase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001345620.1
    NM_125814.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    tropomyosin
    NP_201223.1
    • unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25677072..25678702
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125814.3 → NP_201223.1  tropomyosin [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201223.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UKA7, A0A5S9YGW9, A0A654GDW6, Q9FMG6

    2. NM_001345620.1 → NP_001332145.1  tropomyosin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UKA7, A0A5S9YGW9, A0A654GDW6, Q9FMG6
    Nucleotide Protein
    Heading Accession and Version

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