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    GroES-like zinc-binding alcohol dehydrogenase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836272, updated on 18-Sep-2024

    Summary

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    Official Full Name
    GroES-like zinc-binding alcohol dehydrogenase family protein
    Primary source
    TAIR:AT5G61510
    Locus tag
    AT5G61510
    See related
    Araport:AT5G61510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K11J9.5; K11J9_5
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (24736871..24739002, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene autophagy 3 (APG3) Neighboring gene Major facilitator superfamily protein Neighboring gene small G protein family protein / RhoGAP family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Impact of chloroplastic- and extracellular-sourced ROS on high light-responsive gene expression in Arabidopsis. Bechtold U, et al. J Exp Bot, 2008. PMID 18212028
    2. Novel vascular cell-specific genes whose expression is regulated temporally and spatially during vascular system development. Demura T, et al. Plant Cell, 1994 Jul. PMID 8069107, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001345477.1
    NM_125544.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables NADPH:quinone reductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell differentiation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to high light intensity IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    GroES-like zinc-binding alcohol dehydrogenase family protein
    NP_200959.2
    • GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: cell differentiation, response to high light intensity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G21580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24736871..24739002 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125544.4 → NP_200959.2  GroES-like zinc-binding alcohol dehydrogenase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200959.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UK24, A0A5S9YGR8, A1L4Y4
      Conserved Domains (1) summary
      cd05286
      Location:85 → 406
      QOR2; Quinone oxidoreductase (QOR)

    2. NM_001345477.1 → NP_001330100.1  GroES-like zinc-binding alcohol dehydrogenase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9R5, Q9FKG8
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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