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    SBT5.4 Subtilase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836102, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SBT5.4
    Official Full Name
    Subtilase family protein
    Primary source
    TAIR:AT5G59810
    Locus tag
    AT5G59810
    See related
    Araport:AT5G59810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATSBT5.4; MMN10.6; MMN10_6
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    Genomic context

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    See SBT5.4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (24096807..24100593, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene UPSTREAM OF FLC protein (DUF966) Neighboring gene methyl-CPG-binding domain 7 Neighboring gene C2H2-type zinc finger family protein Neighboring gene DNA-binding protein Neighboring gene Ras-related small GTP-binding family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Overexpression of an Arabidopsis gene encoding a subtilase (AtSBT5.4) produces a clavata-like phenotype. Liu JX, et al. Planta, 2009 Sep. PMID 19588163
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The role of one subtilase, AtSBT5.4, in whole plant physiology was investigated by examining gain- or loss-of-function phenotypes.
      Title: Overexpression of an Arabidopsis gene encoding a subtilase (AtSBT5.4) produces a clavata-like phenotype.
    Submit: New GeneRIF Correction

    General gene information

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    NM_125373.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maintenance of meristem identity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Subtilase family protein
    NP_200789.2
    • SBT5.4; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT2G04160.1); Has 6522 Blast hits to 5856 proteins in 960 species: Archae - 194; Bacteria - 3635; Metazoa - 89; Fungi - 206; Plants - 1959; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24096807..24100593 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125373.3 → NP_200789.2  Subtilase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200789.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JXC5, Q8GXU1, Q9FJF3
      UniProtKB/TrEMBL
      A0A178UAS4
      Conserved Domains (3) summary
      cd04852
      Location:124 → 600
      Peptidases_S8_3; Peptidase S8 family domain, uncharacterized subfamily 3
      cd02120
      Location:367 → 496
      PA_subtilisin_like; PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases. This group contains various PA domain-containing subtilisin-like proteases including melon cucumisin, Arabidopsis thaliana Ara12, a nodule specific serine protease from ...
      pfam05922
      Location:41 → 126
      Inhibitor_I9; Peptidase inhibitor I9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4JXC5.1

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