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    TRM24 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835260, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TRM24
    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT5G51850
    Locus tag
    AT5G51850
    See related
    Araport:AT5G51850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MIO24.1; MIO24_1; TON1 Recruiting Motif 24
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    Genomic context

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    See TRM24 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (21079106..21081632)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene junctophilin-like protein Neighboring gene Defensin-like (DEFL) family protein Neighboring gene K-box region and MADS-box transcription factor family protein Neighboring gene AGAMOUS-like 71

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of a phosphatase 2C protein as an interacting partner of the histone acetyltransferase GCN5 in Arabidopsis. Servet C, et al. Biochim Biophys Acta, 2008 Jun-Jul. PMID 18498779
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001344964.1
    NM_124564.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_199998.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62170.1); Has 384 Blast hits to 375 proteins in 79 species: Archae - 0; Bacteria - 14; Metazoa - 135; Fungi - 31; Plants - 92; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21079106..21081632
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124564.4 → NP_199998.1  uncharacterized protein AT5G51850 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199998.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UFN7, A0A178UGY2, Q9FLH6
      Conserved Domains (2) summary
      pfam14309
      Location:433 → 515
      DUF4378; Domain of unknown function (DUF4378)
      pfam14383
      Location:107 → 138
      VARLMGL; DUF761-associated sequence motif

    2. NM_001344964.1 → NP_001332233.1  uncharacterized protein AT5G51850 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UGY2, A0A1P8BGA2
    Nucleotide Protein
    Heading Accession and Version

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