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    SPFH/Band 7/PHB domain-containing membrane-associated protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835231, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SPFH/Band 7/PHB domain-containing membrane-associated protein family
    Primary source
    TAIR:AT5G51570
    Locus tag
    AT5G51570
    See related
    Araport:AT5G51570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K17N15.12; K17N15_12
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (20949291..20951512)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene EXORDIUM like 3 Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene AT hook motif DNA-binding family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Telomerase Interaction Partners-Insight from Plants. Fulnečková J, et al. Int J Mol Sci, 2021 Dec 29. PMID 35008793, Free PMC Article
    2. Tandem affinity purification of AtTERT reveals putative interaction partners of plant telomerase in vivo. Majerská J, et al. Protoplasma, 2017 Jul. PMID 27853871
    3. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
    4. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article
    5. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_124536.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plasmodesma HDA PubMed 
    located_in plastid HDA PubMed 
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    SPFH/Band 7/PHB domain-containing membrane-associated protein family
    NP_199970.1
    • SPFH/Band 7/PHB domain-containing membrane-associated protein family; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G62740.1); Has 5870 Blast hits to 5870 proteins in 1885 species: Archae - 189; Bacteria - 4209; Metazoa - 145; Fungi - 209; Plants - 268; Viruses - 20; Other Eukaryotes - 830 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      20949291..20951512
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124536.4 → NP_199970.1  SPFH/Band 7/PHB domain-containing membrane-associated protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199970.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FHM7
      UniProtKB/TrEMBL
      A0A178UM06, A0A5S9YFD3
      Conserved Domains (1) summary
      cd03407
      Location:11 → 280
      SPFH_like_u4; Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FHM7.1

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