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    heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834841, updated on 18-Sep-2024

    Summary

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    Official Full Name
    heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624)
    Primary source
    TAIR:AT5G47900
    Locus tag
    AT5G47900
    See related
    Araport:AT5G47900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MCA23.24; MCA23_24
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    14
    Sequence:
    Chromosome: 5; NC_003076.8 (19392166..19395287)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene eukaryotic release factor 1-1 Neighboring gene NADH-ubiquinone oxidoreductase B8 subunit Neighboring gene respiratory burst oxidase homologue D Neighboring gene transcription elongation factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001125920.1
    NM_001125921.1
    NM_001161293.1
    NM_001161294.2
    NM_001161295.1
    NM_001203558.1
    NM_001344751.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624)
    NP_001119392.1
    • Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001119393.1
    • Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001154765.1
    • Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1); Has 945 Blast hits to 942 proteins in 239 species: Archae - 0; Bacteria - 509; Metazoa - 108; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink).
    NP_001154766.1
    • Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1); Has 935 Blast hits to 932 proteins in 238 species: Archae - 0; Bacteria - 509; Metazoa - 106; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink).
    NP_001154767.1
    • Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1); Has 735 Blast hits to 733 proteins in 216 species: Archae - 0; Bacteria - 383; Metazoa - 101; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).
    NP_001190487.1
    • Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1).
    NP_199601.2
    • Protein of unknown function (DUF1624); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19392166..19395287
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344752.1 → NP_001330884.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UBF5, A0A1P8BC70

    2. NM_001344753.1 → NP_001330885.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YC02, A0A654G8Z1, B3H4C1
      Conserved Domains (1) summary
      cl21495
      Location:45 → 410
      Acyl_transf_3; Acyltransferase family

    3. NM_124164.3 → NP_199601.2  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199601.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YC02, A0A654G8Z1, B3H4C1
      Conserved Domains (1) summary
      cl21495
      Location:45 → 410
      Acyl_transf_3; Acyltransferase family

    4. NM_001344750.1 → NP_001330886.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BC52, A0A5S9YC02, A0A654G8Z1

    5. NM_001203558.1 → NP_001190487.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190487.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UBF5, F4K034
      Conserved Domains (1) summary
      cl21495
      Location:45 → 316
      DUF418; Protein of unknown function (DUF418)

    6. NM_001161293.1 → NP_001154765.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154765.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K038
      Conserved Domains (1) summary
      cl21495
      Location:39 → 310
      DUF418; Protein of unknown function (DUF418)

    7. NM_001161294.2 → NP_001154766.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154766.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K036
      Conserved Domains (1) summary
      cl21495
      Location:45 → 227
      DUF418; Protein of unknown function (DUF418)

    8. NM_001125920.1 → NP_001119392.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119392.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UBF5, B3H490
      Conserved Domains (1) summary
      cl21495
      Location:45 → 316
      DUF418; Protein of unknown function (DUF418)

    9. NM_001125921.1 → NP_001119393.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119393.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B6EUB5
      Conserved Domains (1) summary
      cl21495
      Location:45 → 264
      DUF418; Protein of unknown function (DUF418)

    10. NM_001161295.1 → NP_001154767.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154767.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K039
      Conserved Domains (1) summary
      cl21495
      Location:50 → 310
      DUF418; Protein of unknown function (DUF418)

    11. NM_001344751.1 → NP_001330887.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BC67
    Nucleotide Protein
    Heading Accession and Version

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