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    Avr9/Cf-9 rapidly elicited protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834186, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Avr9/Cf-9 rapidly elicited protein
    Primary source
    TAIR:AT5G41810
    Locus tag
    AT5G41810
    See related
    Araport:AT5G41810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K16L22.9; K16L22_9
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (16738062..16739790)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene COP1-interactive protein 1 Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene RAB geranylgeranyl transferase alpha subunit 2 Neighboring gene RNI-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_123546.3
    NM_180787.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Avr9/Cf-9 rapidly elicited protein
    NP_568598.3
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink).
    NP_851118.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 876 Blast hits to 690 proteins in 132 species: Archae - 0; Bacteria - 38; Metazoa - 180; Fungi - 112; Plants - 59; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      16738062..16739790
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123546.3 → NP_568598.3  Avr9/Cf-9 rapidly elicited protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568598.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JZY4, Q94BT3

    2. NM_180787.2 → NP_851118.1  Avr9/Cf-9 rapidly elicited protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851118.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UFQ3, Q8LF29, Q9FJ33
    Nucleotide Protein
    Heading Accession and Version

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