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    Defensin-like (DEFL) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834013, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Defensin-like (DEFL) family protein
    Primary source
    TAIR:AT5G40155
    Locus tag
    AT5G40155
    See related
    Araport:AT5G40155
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Summary
    Encodes a defensin-like (DEFL) family protein.
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (16061891..16062548)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein with ARM repeat domain-containing protein Neighboring gene Peroxidase superfamily protein Neighboring gene peroxidase Neighboring gene Ankyrin repeat family protein Neighboring gene receptor like protein 54 Neighboring gene Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_123379.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Defensin-like (DEFL) family protein
    NP_568576.2
    • Defensin-like (DEFL) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      16061891..16062548
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123379.3 → NP_568576.2  Defensin-like (DEFL) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568576.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q1PDQ0, Q3E8K0
      UniProtKB/TrEMBL
      A0A178UU00, A0A5S9YA45
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3E8K0.2

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