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    MADS-box family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834004, updated on 18-Sep-2024

    Summary

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    Official Full Name
    MADS-box family protein
    Primary source
    TAIR:AT5G40070
    Locus tag
    AT5G40070
    See related
    Araport:AT5G40070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MUD12.50; MUD12_50
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (16039179..16039747)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene F-box/FBD-like domains containing protein Neighboring gene Disease resistance protein (NBS-LRR class) family Neighboring gene Mitochondrial ribosomal protein L27 Neighboring gene Disease resistance protein (TIR-NBS class) Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    MADS-box family protein
    NP_198823.1
    • MADS-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: AGAMOUS-like 75 (TAIR:AT5G41200.1); Has 52 Blast hits to 49 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      16039179..16039747
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123370.1 → NP_198823.1  MADS-box family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198823.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G6P6, F4KFY2
    Nucleotide Protein
    Heading Accession and Version

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