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    CIPK5 CBL-interacting protein kinase 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830960, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CIPK5
    Official Full Name
    CBL-interacting protein kinase 5
    Primary source
    TAIR:AT5G10930
    Locus tag
    AT5G10930
    See related
    Araport:AT5G10930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CBL-interacting protein kinase 5; CBL-INTERACTING PROTEIN KINASE 5; SNF1-RELATED PROTEIN KINASE 3.24; SnRK3.24; T30N20.200; T30N20_200
    Summary
    Encodes CBL-interacting protein kinase 5 (CIPK5).
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    Genomic context

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    See CIPK5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (3445029..3447278, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene mraW methylase family protein Neighboring gene L-Aspartase-like family protein Neighboring gene transducin family protein / WD-40 repeat family protein Neighboring gene uncharacterized protein Neighboring gene microRNA ath-MIR156d precursor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Interaction specificity of Arabidopsis calcineurin B-like calcium sensors and their target kinases. Kim KN, et al. Plant Physiol, 2000 Dec. PMID 11115898, Free PMC Article
    2. Genome-Wide Identification and Characterization of Calcium Metabolism Related Gene Families in Arabidopsis thaliana and Their Regulation by Bacillus amyloliquefaciens Under High Calcium Stress. Gong J, et al. Front Plant Sci, 2021. PMID 34456948, Free PMC Article
    3. Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signaling networks. Kolukisaoglu U, et al. Plant Physiol, 2004 Jan. PMID 14730064, Free PMC Article
    4. Comprehensive structural, interaction and expression analysis of CBL and CIPK complement during abiotic stresses and development in rice. Kanwar P, et al. Cell Calcium, 2014 Aug. PMID 24970010
    5. A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Waidmann S, et al. Plant Cell, 2014 Nov. PMID 25387881, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_121131.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in response to calcium ion IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    CBL-interacting protein kinase 5
    NP_568241.2
    • CBL-interacting protein kinase 5 (CIPK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 25 (TAIR:AT5G25110.1); Has 132030 Blast hits to 129710 proteins in 4599 species: Archae - 195; Bacteria - 15419; Metazoa - 48583; Fungi - 13177; Plants - 32322; Viruses - 524; Other Eukaryotes - 21810 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3445029..3447278 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121131.3 → NP_568241.2  CBL-interacting protein kinase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568241.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8H0X3, Q9LEU7, Q9LKF7
      UniProtKB/TrEMBL
      A0A178UH74, A0A654G031
      Conserved Domains (2) summary
      cd12195
      Location:313 → 427
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      cd14663
      Location:11 → 266
      STKc_SnRK3; Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LEU7.1

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