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    ER membrane protein complex subunit-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830945, updated on 18-Sep-2024

    Summary

    Official Full Name
    ER membrane protein complex subunit-like protein
    Primary source
    TAIR:AT5G10780
    Locus tag
    AT5G10780
    See related
    Araport:AT5G10780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T30N20.50; T30N20_50
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    Genomic context

    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (3408209..3410076)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene ubiquitin-specific protease 22 Neighboring gene RNA recognition motif (RRM)-containing protein Neighboring gene enhancer of rudimentary protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001085099.1
    NM_121116.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    ER membrane protein complex subunit-like protein
    NP_001078568.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 395 Blast hits to 395 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 122; Plants - 51; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
    NP_568238.1
    • CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3408209..3410076
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121116.4NP_568238.1  ER membrane protein complex subunit-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568238.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UBU9, A0A654FZZ5, Q93VE6
      Conserved Domains (1) summary
      pfam06417
      Location:51166
      DUF1077; Protein of unknown function (DUF1077)
    2. NM_001085099.1NP_001078568.1  ER membrane protein complex subunit-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078568.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UBU9, A8MQD8
      Conserved Domains (1) summary
      pfam06417
      Location:51166
      DUF1077; Protein of unknown function (DUF1077)