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    E2F-associated phosphoprotein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830728, updated on 18-Sep-2024

    Summary

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    Official Full Name
    E2F-associated phosphoprotein
    Primary source
    TAIR:AT5G08320
    Locus tag
    AT5G08320
    See related
    Araport:AT5G08320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8L15.50; F8L15_50
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (2677037..2678819)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Defensin-like (DEFL) family protein Neighboring gene TCP family transcription factor Neighboring gene Isoprenylcysteine carboxyl methyltransferase (ICMT) family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_120915.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    E2F-associated phosphoprotein
    NP_196449.1
    • CONTAINS InterPro DOMAIN/s: E2F-associated phosphoprotein, C-terminal (InterPro:IPR019370); Has 149 Blast hits to 149 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2677037..2678819
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342995.1 → NP_001331548.1  E2F-associated phosphoprotein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BE85
      Conserved Domains (1) summary
      pfam10238
      Location:26 → 66
      Eapp_C; E2F-associated phosphoprotein

    2. NM_120915.2 → NP_196449.1  E2F-associated phosphoprotein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196449.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UFH3, Q9FTA3
      Conserved Domains (1) summary
      pfam10238
      Location:26 → 148
      Eapp_C; E2F-associated phosphoprotein
    Nucleotide Protein
    Heading Accession and Version

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