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    CTRG_05580 hypothetical protein [ Candida tropicalis MYA-3404 ]

    Gene ID: 8300711, updated on 17-May-2024

    Summary

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    Gene symbol
    CTRG_05580
    Gene description
    hypothetical protein
    Locus tag
    CTRG_05580
    See related
    FungiDB:CTRG_05580; VEuPathDB:CTRG_05580
    Gene type
    protein coding
    RNA name
    conserved hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Candida tropicalis MYA-3404 (strain: MYA-3404)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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    Genomic context

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    See CTRG_05580 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_003020061.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003020061.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of pathogenicity and sexual reproduction in eight Candida genomes. Butler G, et al. Nature, 2009 Jun 4. PMID 19465905, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein
    XP_002551282.1
    • Candida DB at Institut Pasteur CTRG_05580

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003020061.1 Reference assembly

      Range
      22142..24154 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002551236.1 → XP_002551282.1  conserved hypothetical protein [Candida tropicalis MYA-3404]

      See identical proteins and their annotated locations for XP_002551282.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C5MHN7
      Conserved Domains (3) summary
      COG1196
      Location:160 → 456
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam12329
      Location:133 → 206
      TMF_DNA_bd; TATA element modulatory factor 1 DNA binding
      pfam12325
      Location:551 → 664
      TMF_TATA_bd; TATA element modulatory factor 1 TATA binding
    Protein Accession Links
    GenPept Link UniProtKB Link
    EER30584.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials