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    ABCG9 ABC-2 type transporter family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828850, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ABCG9
    Official Full Name
    ABC-2 type transporter family protein
    Primary source
    TAIR:AT4G27420
    Locus tag
    AT4G27420
    See related
    Araport:AT4G27420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATP-binding cassette G9; F27G19.20; F27G19_20
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    Genomic context

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    See ABCG9 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (13712199..13714797, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene COP1-interacting protein 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Secretory COPII Protein SEC31B Is Required for Pollen Wall Development. Zhao B, et al. Plant Physiol, 2016 Nov. PMID 27634427, Free PMC Article
    2. The role of Arabidopsis ABCG9 and ABCG31 ATP binding cassette transporters in pollen fitness and the deposition of steryl glycosides on the pollen coat. Choi H, et al. Plant Cell, 2014 Jan. PMID 24474628, Free PMC Article
    3. ABCG9, ABCG11 and ABCG14 ABC transporters are required for vascular development in Arabidopsis. Le Hir R, et al. Plant J, 2013 Dec. PMID 24112720
    4. AP1/2β-mediated exocytosis of tapetum-specific transporters is required for pollen development in Arabidopsis thaliana. Liu C, et al. Plant Cell, 2022 Sep 27. PMID 35766888, Free PMC Article
    5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. ABCG9 and ABCG31 contribute to the accumulation of this sterol on the surface of pollen.
      Title: The role of Arabidopsis ABCG9 and ABCG31 ATP binding cassette transporters in pollen fitness and the deposition of steryl glycosides on the pollen coat.
    2. ABCG9, ABCG11 and ABCG14 are expressed in the vascular system. Mutations are responsible for defects in plant growth and affect vascular patterning. [ABCG9]
      Title: ABCG9, ABCG11 and ABCG14 ABC transporters are required for vascular development in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_118876.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATPase-coupled transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein homodimerization activity IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cotyledon vascular tissue pattern formation IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within cotyledon vascular tissue pattern formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in glycoside transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pollen wall assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within stem vascular tissue pattern formation IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    located_in pollen coat IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ABC-2 type transporter family protein
    NP_194472.3
    • ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, sepal, flower, egg cell; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 389492 Blast hits to 355855 proteins in 4126 species: Archae - 7031; Bacteria - 309319; Metazoa - 8330; Fungi - 6395; Plants - 5225; Viruses - 7; Other Eukaryotes - 53185 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13712199..13714797 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118876.4 → NP_194472.3  ABC-2 type transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194472.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JIV3, Q9SZR9
      UniProtKB/TrEMBL
      A0A178V178, A0A5S9XYH5
      Conserved Domains (1) summary
      PLN03211
      Location:19 → 632
      PLN03211; ABC transporter G-25; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SZR9.2

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