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    ATS1 peroxygenase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828781, updated on 18-Sep-2024

    Summary

    Official Symbol
    ATS1
    Official Full Name
    peroxygenase 1
    Primary source
    TAIR:AT4G26740
    Locus tag
    AT4G26740
    See related
    Araport:AT4G26740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA PEROXYGENASE 1; AtCLO1; ATPXG1; CALEOSIN1; CLO1; F10M23.80; F10M23_80; seed gene 1
    Summary
    Encodes caleosin, a 27-kDa protein found within seed lipid bodies. Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27. Catalyze hydroperoxide-dependent mono-oxygenation reactions. Require calcium for peroxygenase activity. Probably deeply buried in lipid droplets or microsomes.
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    Genomic context

    See ATS1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (13473516..13475371, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ATPase, V0 complex, subunit E Neighboring gene protein phosphatase X 1 Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene microtubule-associated protein 65-2

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_118808.5

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in lipid droplet PubMed 
    located_in monolayer-surrounded lipid storage body PubMed 

    General protein information

    Preferred Names
    peroxygenase 1
    NP_194404.1
    • seed gene 1 (ATS1); FUNCTIONS IN: heme oxygenase (decyclizing) activity, linoleic acid epoxygenase activity, monooxygenase activity, calcium ion binding; INVOLVED IN: oxylipin biosynthetic process, lipid particle organization, defense response, embryo development ending in seed dormancy; LOCATED IN: integral to membrane; EXPRESSED IN: embryo; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS THALIANA PEROXYGENASE 2 (TAIR:AT5G55240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13473516..13475371 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118808.5 → NP_194404.1  peroxygenase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194404.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81270, Q8VZS4
      UniProtKB/TrEMBL
      A0A178V1E1, A0A5S9XWU8
      Conserved Domains (1) summary
      pfam05042
      Location:63 → 231
      Caleosin; Caleosin related protein
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