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    LOC8286584 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [ Ricinus communis (castor bean) ]

    Gene ID: 8286584, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8286584
    Gene description
    5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
    Locus tag
    RCOM_0952830
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8286584 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 8 NC_063263.1 (23443642..23449455, complement)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994304.1 (502722..508510, complement)

    Chromosome 8 - NC_063263.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8286582 Neighboring gene UDP-glycosyltransferase 73C12-like Neighboring gene importin subunit beta-1 Neighboring gene molybdopterin biosynthesis protein CNX1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in methionine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063263.1 Reference ASM1957865v1

      Range
      23443642..23449455 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002515806.4 → XP_002515852.1  5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase

      See identical proteins and their annotated locations for XP_002515852.1

      UniProtKB/TrEMBL
      B9RQ33
      Conserved Domains (3) summary
      PLN02475
      Location:51 → 815
      PLN02475; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
      cd03312
      Location:53 → 417
      CIMS_N_terminal_like; CIMS - Cobalamine-independent methonine synthase, or MetE, N-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme ...
      pfam01717
      Location:482 → 805
      Meth_synt_2; Cobalamin-independent synthase, Catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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