U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Terpenoid cyclases/Protein prenyltransferases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827766, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    Terpenoid cyclases/Protein prenyltransferases superfamily protein
    Primary source
    TAIR:AT4G20200
    Locus tag
    AT4G20200
    See related
    Araport:AT4G20200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1C12.120; F1C12_120
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (10908672..10911151, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Terpenoid cyclases/Protein prenyltransferases superfamily protein Neighboring gene Reverse transcriptase (RNA-dependent DNA polymerase)

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables terpene synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in diterpenoid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Terpenoid cyclases/Protein prenyltransferases superfamily protein
    NP_193753.1
    • Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT4G20230.1); Has 1668 Blast hits to 1644 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1; Plants - 1662; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10908672..10911151 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118139.1 → NP_193753.1  Terpenoid cyclases/Protein prenyltransferases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193753.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65434
      UniProtKB/TrEMBL
      A0A5S9XU94
      Conserved Domains (1) summary
      cd00684
      Location:62 → 601
      Terpene_cyclase_plant_C1; Plant Terpene Cyclases, Class 1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O65434.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.