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    PTAC9 plastid transcriptionally active 9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827746, updated on 18-Sep-2024

    Summary

    Official Symbol
    PTAC9
    Official Full Name
    plastid transcriptionally active 9
    Primary source
    TAIR:AT4G20010
    Locus tag
    AT4G20010
    See related
    Araport:AT4G20010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18F4.110; F18F4_110; ORGANELLAR SINGLE-STRANDED DNA BINDING PROTEIN 2; OSB2; plastid transcriptionally active 9
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    Genomic context

    See PTAC9 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (10841935..10844124)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein Neighboring gene FAR1-related sequence 1 Neighboring gene VQ motif-containing protein Neighboring gene multiple organellar RNA editing factor Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene Pectin lyase-like superfamily protein

    General gene information

    NM_001036597.2
    NM_118120.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables single-stranded DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in DNA replication IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
     
    located_in chloroplast nucleoid HDA PubMed 

    General protein information

    Preferred Names
    plastid transcriptionally active 9
    NP_001031674.1
    • plastid transcriptionally active 9 (PTAC9); FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plastid chromosome, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Primosome PriB/single-strand DNA-binding (InterPro:IPR000424); BEST Arabidopsis thaliana protein match is: organellar single-stranded DNA binding protein 3 (TAIR:AT5G44785.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_567593.1
    • plastid transcriptionally active 9 (PTAC9); FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plastid chromosome, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Primosome PriB/single-strand DNA-binding (InterPro:IPR000424); BEST Arabidopsis thaliana protein match is: organellar single-stranded DNA binding protein 3 (TAIR:AT5G44785.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10841935..10844124
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118120.5NP_567593.1  plastid transcriptionally active 9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567593.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49428, Q2V3G8, Q8GXH3
      UniProtKB/TrEMBL
      A0A178UX75, A0A5S9XU50, A0A654FR17
      Conserved Domains (1) summary
      cl09930
      Location:101172
      RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.
    2. NM_001036597.2NP_001031674.1  plastid transcriptionally active 9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031674.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XU50, A0A654FR17
      Conserved Domains (1) summary
      cl09930
      Location:101172
      RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.