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    LOC8275217 probable CoA ligase CCL7 [ Ricinus communis (castor bean) ]

    Gene ID: 8275217, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8275217
    Gene description
    probable CoA ligase CCL7
    Locus tag
    RCOM_0473330
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8275217 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 8 NC_063263.1 (15510035..15514426)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994426.1 (118739..123541, complement)

    Chromosome 8 - NC_063263.1Genomic Context describing neighboring genes Neighboring gene transcription factor RAX2 Neighboring gene lactoylglutathione lyase Neighboring gene uncharacterized LOC112535558 Neighboring gene heavy metal-associated isoprenylated plant protein 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables CoA-ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable CoA ligase CCL7
    Names
    4-coumarate--CoA ligase-like 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063263.1 Reference ASM1957865v1

      Range
      15510035..15514426
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002523652.4 → XP_002523698.1  probable CoA ligase CCL7

      See identical proteins and their annotated locations for XP_002523698.1

      UniProtKB/TrEMBL
      B9SCH9
      Conserved Domains (2) summary
      cd05904
      Location:21 → 534
      4CL; 4-Coumarate-CoA Ligase (4CL)
      PLN02246
      Location:11 → 538
      PLN02246; 4-coumarate--CoA ligase
    Nucleotide Protein
    Heading Accession and Version

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