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    senescence-associated family protein (DUF581) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827487, updated on 18-Sep-2024

    Summary

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    Official Full Name
    senescence-associated family protein (DUF581)
    Primary source
    TAIR:AT4G17670
    Locus tag
    AT4G17670
    See related
    Araport:AT4G17670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DL4870C; FCAALL.414
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (9833491..9834859, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Polyketide cyclase / dehydrase and lipid transport protein Neighboring gene Protein kinase superfamily protein Neighboring gene SBP (S-ribonuclease binding protein) family protein Neighboring gene Peroxidase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression of Arabidopsis FCS-Like Zinc finger genes is differentially regulated by sugars, cellular energy level, and abiotic stress. Jamsheer K M, et al. Front Plant Sci, 2015. PMID 26442059, Free PMC Article
    2. The complex becomes more complex: protein-protein interactions of SnRK1 with DUF581 family proteins provide a framework for cell- and stimulus type-specific SnRK1 signaling in plants. Nietzsche M, et al. Front Plant Sci, 2014. PMID 24600465, Free PMC Article
    3. An abscisic acid-responsive protein interaction network for sucrose non-fermenting related kinase1 in abiotic stress response. Carianopol CS, et al. Commun Biol, 2020 Mar 26. PMID 32218501, Free PMC Article
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_117875.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in response to glucose IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to mannose IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to starvation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to sucrose IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    senescence-associated family protein (DUF581)
    NP_567534.1
    • Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G47060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      9833491..9834859 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117875.4 → NP_567534.1  senescence-associated family protein (DUF581) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567534.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O23607, Q8L9G6, Q8VZM9
      UniProtKB/TrEMBL
      A0A178UXI1, A0A5S9XTF0
      Conserved Domains (1) summary
      pfam04570
      Location:70 → 117
      zf-FLZ; zinc-finger of the FCS-type, C2-C2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8VZM9.1

    Gene LinkOut

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