U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC8269715 lysosomal Pro-X carboxypeptidase [ Ricinus communis (castor bean) ]

    Gene ID: 8269715, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC8269715
    Gene description
    lysosomal Pro-X carboxypeptidase
    Locus tag
    RCOM_1258640
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC8269715 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 10 NC_063265.1 (16751228..16757444, complement)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994718.1 (36402..42575)

    Chromosome 10 - NC_063265.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8269718 Neighboring gene B3 domain-containing protein At2g36080 Neighboring gene uncharacterized protein At5g41620 Neighboring gene bifunctional nitrilase/nitrile hydratase NIT4B

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dipeptidyl-peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables serine-type exopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    lysosomal Pro-X carboxypeptidase

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063265.1 Reference ASM1957865v1

      Range
      16751228..16757444 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002530474.4 → XP_002530520.2  lysosomal Pro-X carboxypeptidase

      UniProtKB/TrEMBL
      B9SX01
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials