U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC8267253 L-ascorbate oxidase homolog [ Ricinus communis (castor bean) ]

    Gene ID: 8267253, updated on 30-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC8267253
    Gene description
    L-ascorbate oxidase homolog
    Locus tag
    RCOM_0602360
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC8267253 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 7 NC_063262.1 (2532765..2536555, complement)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994396.1 (247981..251716)

    Chromosome 7 - NC_063262.1Genomic Context describing neighboring genes Neighboring gene dof zinc finger protein DOF3.7 Neighboring gene L-ascorbate oxidase homolog Neighboring gene reticulon-like protein B13 Neighboring gene RPW8-like protein 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    L-ascorbate oxidase homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063262.1 Reference ASM1957865v1

      Range
      2532765..2536555 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015721272.3 → XP_015576758.1  L-ascorbate oxidase homolog

      UniProtKB/TrEMBL
      B9S8L8
      Conserved Domains (1) summary
      PLN02835
      Location:1 → 539
      PLN02835; oxidoreductase

    2. XM_002522291.4 → XP_002522337.1  L-ascorbate oxidase homolog

      See identical proteins and their annotated locations for XP_002522337.1

      UniProtKB/TrEMBL
      B9S8L8
      Conserved Domains (1) summary
      PLN02835
      Location:1 → 539
      PLN02835; oxidoreductase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials