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    Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826564, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Protein kinase superfamily protein
    Primary source
    TAIR:AT4G09760
    Locus tag
    AT4G09760
    See related
    Araport:AT4G09760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17A8.110; F17A8_110
    Summary
    encodes a choline synthase whose gene expression is induced by high salt and mannitol.
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (6148758..6151399, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene glycosyl hydrolase 9B14 Neighboring gene pseudo Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene TRAF-like family protein Neighboring gene non-LTR retroelement reverse transcriptase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_001340632.1
    NM_117044.3
    NM_179019.1
    NM_202797.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables choline kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Protein kinase superfamily protein
    NP_192714.1
    • Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: choline kinase 1 (TAIR:AT1G71697.1); Has 1546 Blast hits to 1491 proteins in 370 species: Archae - 0; Bacteria - 353; Metazoa - 436; Fungi - 251; Plants - 163; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink).
    NP_849350.1
    • Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: choline kinase 1 (TAIR:AT1G71697.1); Has 1546 Blast hits to 1491 proteins in 370 species: Archae - 0; Bacteria - 353; Metazoa - 436; Fungi - 251; Plants - 163; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink).
    NP_974526.1
    • Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: choline kinase 1 (TAIR:AT1G71697.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      6148758..6151399 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117044.3 → NP_192714.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192714.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L9C6, Q8LF42, Q9SZ92
      UniProtKB/TrEMBL
      A0A654FMR6, A0A7G2EZ83
      Conserved Domains (1) summary
      PLN02236
      Location:1 → 343
      PLN02236; choline kinase

    2. NM_202797.1 → NP_974526.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974526.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V545, F4JKS6
      Conserved Domains (1) summary
      cl21453
      Location:38 → 223
      PKc_like; Protein Kinases, catalytic domain

    3. NM_179019.1 → NP_849350.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849350.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L9C6, Q8LF42, Q9SZ92
      UniProtKB/TrEMBL
      A0A654FMR6, A0A7G2EZ83
      Conserved Domains (1) summary
      PLN02236
      Location:1 → 343
      PLN02236; choline kinase

    4. NM_001340632.1 → NP_001328983.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V131, A0A1P8B6C2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SZ92.1

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