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    GASA3 GAST1 protein homolog 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826545, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GASA3
    Official Full Name
    GAST1 protein homolog 3
    Primary source
    TAIR:AT4G09600
    Locus tag
    AT4G09600
    See related
    Araport:AT4G09600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    GAST1 protein homolog 3; T25P22.40; T25P22_40
    Summary
    One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato.
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    Genomic context

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    See GASA3 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (6072804..6073646, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene NDR1/HIN1-like 22 Neighboring gene pseudo Neighboring gene GAST1 protein homolog 2 Neighboring gene Mitochondrial transcription termination factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. GASA, a gibberellin-regulated gene family from Arabidopsis thaliana related to the tomato GAST1 gene. Herzog M, et al. Plant Mol Biol, 1995 Feb. PMID 7727751
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_117028.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to gibberellin TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    GAST1 protein homolog 3
    NP_192698.1
    • GAST1 protein homolog 3 (GASA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: fruit, seed, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 2 (TAIR:AT4G09610.1); Has 469 Blast hits to 469 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 469; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      6072804..6073646 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117028.4 → NP_192698.1  GAST1 protein homolog 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192698.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P46687
      UniProtKB/TrEMBL
      A0A5S9XQR0, A0A654FMN1
      Conserved Domains (1) summary
      pfam02704
      Location:40 → 99
      GASA; Gibberellin regulated protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P46687.1

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