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    LOC8258294 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [ Ricinus communis (castor bean) ]

    Gene ID: 8258294, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8258294
    Gene description
    protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic
    Locus tag
    RCOM_1497070
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8258294 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 4 NC_063259.1 (29865475..29869976, complement)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994278.1 (338841..342227)

    Chromosome 4 - NC_063259.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112536402 Neighboring gene BAG family molecular chaperone regulator 1 Neighboring gene dihydrodipicolinate reductase-like protein CRR1, chloroplastic Neighboring gene probable transcriptional regulator SLK2 Neighboring gene uncharacterized LOC112536359 Neighboring gene F-box protein PP2-A13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cytochrome b6f complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063259.1 Reference ASM1957865v1

      Range
      29865475..29869976 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015726270.3 → XP_015581756.1  protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2

      UniProtKB/TrEMBL
      B9R9G3
      Conserved Domains (1) summary
      pfam11152
      Location:65 → 276
      DUF2930; Protein of unknown function (DUF2930)

    2. XM_015726274.3 → XP_015581760.1  protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X3

      UniProtKB/TrEMBL
      B9R9G3
      Conserved Domains (1) summary
      pfam11152
      Location:65 → 276
      DUF2930; Protein of unknown function (DUF2930)

    3. XM_015726267.3 → XP_015581753.1  protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

      UniProtKB/TrEMBL
      B9R9G3
      Conserved Domains (1) summary
      pfam11152
      Location:65 → 276
      DUF2930; Protein of unknown function (DUF2930)

    RNA

    1. XR_001536060.3 RNA Sequence

    2. XR_007215588.1 RNA Sequence

    3. XR_001536059.3 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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