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    TOM20-1 translocase outer membrane 20-1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822325, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TOM20-1
    Official Full Name
    translocase outer membrane 20-1
    Primary source
    TAIR:AT3G27070
    Locus tag
    AT3G27070
    See related
    Araport:AT3G27070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    translocase outer membrane 20-1
    Summary
    Form of TOM20, which is a component of the TOM complex, involved in transport of nuclear-encoded mitochondrial proteins
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    Genomic context

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    See TOM20-1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (9982959..9984808, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene MATH domain/coiled-coil protein Neighboring gene plant/protein Neighboring gene Ferritin/ribonucleotide reductase-like family protein Neighboring gene translocase of outer membrane 20 kDa subunit 3 Neighboring gene DCD (Development and Cell Death) domain protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Purification and characterization of the preprotein translocase of the outer mitochondrial membrane from Arabidopsis. Identification of multiple forms of TOM20. Werhahn W, et al. Plant Physiol, 2001 Feb. PMID 11161051, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203055.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein-transporting ATPase activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein insertion into mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein targeting to mitochondrion TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TIM23 mitochondrial import inner membrane translocase complex TAS
    Traceable Author Statement
    more info
    		 PubMed 
    part_of mitochondrial outer membrane translocase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of mitochondrial outer membrane translocase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    translocase outer membrane 20-1
    NP_001189984.1
    • translocase outer membrane 20-1 (TOM20-1); CONTAINS InterPro DOMAIN/s: Plant specific mitochondrial import receptor subunit TOM20 (InterPro:IPR010547); BEST Arabidopsis thaliana protein match is: translocase of outer membrane 20 kDa subunit 3 (TAIR:AT3G27080.1).
    NP_189343.1
    • translocase outer membrane 20-1 (TOM20-1); CONTAINS InterPro DOMAIN/s: Plant specific mitochondrial import receptor subunit TOM20 (InterPro:IPR010547); BEST Arabidopsis thaliana protein match is: translocase of outer membrane 20 kDa subunit 3 (TAIR:AT3G27080.1); Has 97 Blast hits to 97 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9982959..9984808 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113621.3 → NP_189343.1  translocase outer membrane 20-1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189343.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P82872, Q9LSC9
      UniProtKB/TrEMBL
      A0A178V749, A0A5S9XG66
      Conserved Domains (1) summary
      pfam06552
      Location:1 → 186
      TOM20_plant; Plant specific mitochondrial import receptor subunit TOM20

    2. NM_001203055.1 → NP_001189984.1  translocase outer membrane 20-1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189984.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JEW8
      Conserved Domains (1) summary
      pfam06552
      Location:1 → 246
      TOM20_plant; Plant specific mitochondrial import receptor subunit TOM20
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P82872.1

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