U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    cell division protein ftsH [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821139, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    cell division protein ftsH
    Primary source
    TAIR:AT3G02450
    Locus tag
    AT3G02450
    See related
    Araport:AT3G02450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16B3.8; F16B3_8
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (502644..505248, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene transmembrane protein, putative (DUF679) Neighboring gene TRICHOME BIREFRINGENCE-LIKE 20 Neighboring gene Ypt/Rab-GAP domain of gyp1p superfamily protein Neighboring gene S-adenosylmethionine decarboxylase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    NM_111112.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP-dependent peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast envelope HDA PubMed 
    located_in cytosol HDA PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    cell division protein ftsH
    NP_186894.1
    • cell division protein ftsH, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 8 (TAIR:AT1G06430.1); Has 43920 Blast hits to 41347 proteins in 3350 species: Archae - 1585; Bacteria - 19560; Metazoa - 4991; Fungi - 3838; Plants - 3354; Viruses - 31; Other Eukaryotes - 10561 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      502644..505248 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111112.4 → NP_186894.1  cell division protein ftsH [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_186894.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LBL6, Q9M895
      UniProtKB/TrEMBL
      A0A178VIN9, A0A5S9X9G8
      Conserved Domains (2) summary
      TIGR01241
      Location:292 → 587
      FtsH_fam; ATP-dependent metalloprotease FtsH
      pfam06480
      Location:147 → 283
      FtsH_ext; FtsH Extracellular
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M895.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools