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    nuclear polyadenylated RNA-binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820550, updated on 18-Sep-2024

    Summary

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    Official Full Name
    nuclear polyadenylated RNA-binding protein
    Primary source
    TAIR:AT3G13480
    Locus tag
    AT3G13480
    See related
    Araport:AT3G13480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (4392463..4394367, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene TATA binding protein 1 Neighboring gene Transketolase family protein Neighboring gene evolutionarily conserved C-terminal region 2 Neighboring gene TCP-1/cpn60 chaperonin family protein Neighboring gene Lysyl-tRNA synthetase, class II Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_112194.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    nuclear polyadenylated RNA-binding protein
    NP_187957.3
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4392463..4394367 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338054.1 → NP_001327070.1  nuclear polyadenylated RNA-binding protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VFV9, A0A5S9XBR9, A0A654F6S6, F4JDC7

    2. NM_112194.4 → NP_187957.3  nuclear polyadenylated RNA-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187957.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VFV9, A0A5S9XBR9, A0A654F6S6, F4JDC7
    Nucleotide Protein
    Heading Accession and Version

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