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    DTA2 downstream target of AGL15 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819191, updated on 18-Sep-2024

    Summary

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    Official Symbol
    DTA2
    Official Full Name
    downstream target of AGL15 2
    Primary source
    TAIR:AT2G45830
    Locus tag
    AT2G45830
    See related
    Araport:AT2G45830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    downstream target of AGL15 2; F4I18.19
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    Genomic context

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    See DTA2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (18865923..18868542)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene GATA type zinc finger transcription factor family protein Neighboring gene DEA(D/H)-box RNA helicase family protein Neighboring gene Remorin family protein Neighboring gene O-glucosyltransferase rumi-like protein (DUF821) Neighboring gene AT hook motif DNA-binding family protein Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001337151.1
    NM_001337152.1
    NM_001337153.1
    NM_001337154.1
    NM_130146.4
    NM_201965.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    downstream target of AGL15 2
    NP_182107.3
    • downstream target of AGL15 2 (DTA2); CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT3G61270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_973694.1
    • downstream target of AGL15 2 (DTA2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: stem, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT3G61270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18865923..18868542
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_201965.2 → NP_973694.1  downstream target of AGL15 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973694.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0WS79, Q6NKS0
      Conserved Domains (1) summary
      pfam05686
      Location:1 → 369
      Glyco_transf_90; Glycosyl transferase family 90

    2. NM_130146.4 → NP_182107.3  downstream target of AGL15 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182107.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W245, F4IH50
      Conserved Domains (1) summary
      pfam05686
      Location:114 → 510
      Glyco_transf_90; Glycosyl transferase family 90

    3. NM_001337151.1 → NP_001324036.1  downstream target of AGL15 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0WS79, Q6NKS0

    4. NM_001337152.1 → NP_001324038.1  downstream target of AGL15 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W245, F4IH50

    5. NM_001337153.1 → NP_001324037.1  downstream target of AGL15 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0WS79, Q6NKS0

    6. NM_001337154.1 → NP_001324039.1  downstream target of AGL15 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0WS79, Q6NKS0
    Nucleotide Protein
    Heading Accession and Version

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