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    M17 glycine-rich protein / late embryogenesis abundant protein (M17) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818725, updated on 18-Sep-2024

    Summary

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    Official Symbol
    M17
    Official Full Name
    glycine-rich protein / late embryogenesis abundant protein (M17)
    Primary source
    TAIR:AT2G41260
    Locus tag
    AT2G41260
    See related
    Araport:AT2G41260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATM17; F13H10.19; F13H10_19
    Summary
    Late-embryogenesis-abundant gene. Involved in the acquisition of desiccation tolerance during late phase of embryogenesis.
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    Genomic context

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    See M17 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (17206452..17207698)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix protein 100 Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene miscRNA Neighboring gene late embryogenesis abundant protein (M10) / LEA protein M10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure, organization and expression of two closely related novel Lea (late-embryogenesis-abundant) genes in Arabidopsis thaliana. Raynal M, et al. Plant Mol Biol, 1999 May. PMID 10394954
    2. The ubiquitous distribution of late embryogenesis abundant proteins across cell compartments in Arabidopsis offers tailored protection against abiotic stress. Candat A, et al. Plant Cell, 2014 Jul. PMID 25005920, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_129691.3
    NM_201927.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    glycine-rich protein / late embryogenesis abundant protein (M17)
    NP_181659.2
    • M17; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein (M10) / LEA protein M10 (TAIR:AT2G41280.1); Has 3422 Blast hits to 2401 proteins in 322 species: Archae - 2; Bacteria - 405; Metazoa - 1403; Fungi - 273; Plants - 1003; Viruses - 37; Other Eukaryotes - 299 (source: NCBI BLink).
    NP_973656.1
    • M17; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein (M10) / LEA protein M10 (TAIR:AT2G41280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17206452..17207698
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_201927.3 → NP_973656.1  glycine-rich protein / late embryogenesis abundant protein (M17) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973656.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L7T1, Q9S7S3
      UniProtKB/TrEMBL
      A0A178VR90, A0A7G2EDB1

    2. NM_129691.3 → NP_181659.2  glycine-rich protein / late embryogenesis abundant protein (M17) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181659.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X5Z6, A0A7G2EDB1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9S7S3.1

    Gene LinkOut

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