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    BTB/POZ domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817610, updated on 18-Sep-2024

    Summary

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    Official Full Name
    BTB/POZ domain-containing protein
    Primary source
    TAIR:AT2G30600
    Locus tag
    AT2G30600
    See related
    Araport:AT2G30600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AT2G30610; T6B20.5; T6B20_5
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    15
    Sequence:
    Chromosome: 2; NC_003071.7 (13036814..13041684)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene DREB2A-interacting protein 2 Neighboring gene WRKY DNA-binding protein 21 Neighboring gene F-box/LRR protein Neighboring gene ncRNA Neighboring gene winged-helix DNA-binding transcription factor family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036370.2
    NM_001036371.2
    NM_001202713.1
    NM_001336275.1
    NM_128612.3
    NM_179820.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein
    NP_001031447.1
    • BTB/POZ domain-containing protein; INVOLVED IN: cell adhesion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Farnesoic acid 0-methyl transferase (InterPro:IPR022041), BTB/POZ fold (InterPro:IPR011333), Coagulation factor 5/8 type, C-terminal (InterPro:IPR000421), BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001031448.1
    • BTB/POZ domain-containing protein; INVOLVED IN: cell adhesion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Farnesoic acid 0-methyl transferase (InterPro:IPR022041), BTB/POZ fold (InterPro:IPR011333), Coagulation factor 5/8 type, C-terminal (InterPro:IPR000421), BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001189642.1
    • BTB/POZ domain-containing protein; INVOLVED IN: cell adhesion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Coagulation factor 5/8 type, C-terminal (InterPro:IPR000421), Farnesoic acid 0-methyl transferase (InterPro:IPR022041), BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G21780.2).
    NP_180618.2
    • BTB/POZ domain-containing protein; INVOLVED IN: cell adhesion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Farnesoic acid 0-methyl transferase (InterPro:IPR022041), BTB/POZ fold (InterPro:IPR011333), Coagulation factor 5/8 type, C-terminal (InterPro:IPR000421), BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 6426 Blast hits to 6100 proteins in 155 species: Archae - 0; Bacteria - 3; Metazoa - 5211; Fungi - 25; Plants - 879; Viruses - 36; Other Eukaryotes - 272 (source: NCBI BLink).
    NP_850151.1
    • BTB/POZ domain-containing protein; INVOLVED IN: cell adhesion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Farnesoic acid 0-methyl transferase (InterPro:IPR022041), BTB/POZ fold (InterPro:IPR011333), Coagulation factor 5/8 type, C-terminal (InterPro:IPR000421), BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 6426 Blast hits to 6100 proteins in 155 species: Archae - 0; Bacteria - 3; Metazoa - 5211; Fungi - 25; Plants - 879; Viruses - 36; Other Eukaryotes - 272 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13036814..13041684
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001036371.2 → NP_001031448.1  BTB/POZ domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031448.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0Z234, O04334, O04335, Q56YN6, Q8LEV3
      UniProtKB/TrEMBL
      A0A178VNE1, A0A5S9X2Z8
      Conserved Domains (5) summary
      smart00225
      Location:352 → 455
      BTB; Broad-Complex, Tramtrack and Bric a brac
      smart00875
      Location:461 → 582
      BACK; BTB And C-terminal Kelch
      pfam00651
      Location:341 → 452
      BTB; BTB/POZ domain
      pfam00754
      Location:665 → 800
      F5_F8_type_C; F5/8 type C domain
      pfam12248
      Location:51 → 152
      Methyltransf_FA; Farnesoic acid 0-methyl transferase

    2. NM_001202713.1 → NP_001189642.1  BTB/POZ domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189642.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNE1, A0A5S9X2Z8, F4INV5
      Conserved Domains (5) summary
      smart00225
      Location:352 → 455
      BTB; Broad-Complex, Tramtrack and Bric a brac
      smart00875
      Location:507 → 628
      BACK; BTB And C-terminal Kelch
      pfam00651
      Location:341 → 452
      BTB; BTB/POZ domain
      pfam00754
      Location:711 → 846
      F5_F8_type_C; F5/8 type C domain
      pfam12248
      Location:51 → 152
      Methyltransf_FA; Farnesoic acid 0-methyl transferase

    3. NM_128612.3 → NP_180618.2  BTB/POZ domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180618.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0Z234, O04334, O04335, Q56YN6, Q8LEV3
      UniProtKB/TrEMBL
      A0A178VNE1, A0A5S9X2Z8
      Conserved Domains (5) summary
      smart00225
      Location:352 → 455
      BTB; Broad-Complex, Tramtrack and Bric a brac
      smart00875
      Location:461 → 582
      BACK; BTB And C-terminal Kelch
      pfam00651
      Location:341 → 452
      BTB; BTB/POZ domain
      pfam00754
      Location:665 → 800
      F5_F8_type_C; F5/8 type C domain
      pfam12248
      Location:51 → 152
      Methyltransf_FA; Farnesoic acid 0-methyl transferase

    4. NM_001036370.2 → NP_001031447.1  BTB/POZ domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031447.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0Z234, O04334, O04335, Q56YN6, Q8LEV3
      UniProtKB/TrEMBL
      A0A178VNE1, A0A5S9X2Z8
      Conserved Domains (5) summary
      smart00225
      Location:352 → 455
      BTB; Broad-Complex, Tramtrack and Bric a brac
      smart00875
      Location:461 → 582
      BACK; BTB And C-terminal Kelch
      pfam00651
      Location:341 → 452
      BTB; BTB/POZ domain
      pfam00754
      Location:665 → 800
      F5_F8_type_C; F5/8 type C domain
      pfam12248
      Location:51 → 152
      Methyltransf_FA; Farnesoic acid 0-methyl transferase

    5. NM_179820.2 → NP_850151.1  BTB/POZ domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850151.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0Z234, O04334, O04335, Q56YN6, Q8LEV3
      UniProtKB/TrEMBL
      A0A178VNE1, A0A5S9X2Z8
      Conserved Domains (5) summary
      smart00225
      Location:352 → 455
      BTB; Broad-Complex, Tramtrack and Bric a brac
      smart00875
      Location:461 → 582
      BACK; BTB And C-terminal Kelch
      pfam00651
      Location:341 → 452
      BTB; BTB/POZ domain
      pfam00754
      Location:665 → 800
      F5_F8_type_C; F5/8 type C domain
      pfam12248
      Location:51 → 152
      Methyltransf_FA; Farnesoic acid 0-methyl transferase

    6. NM_001336275.1 → NP_001324418.1  BTB/POZ domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNE1, A0A1P8B014, A0A5S9X2Z8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LEV3.1

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