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    hypothetical protein (DUF1644) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817146, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF1644)
    Primary source
    TAIR:AT2G26050
    Locus tag
    AT2G26050
    See related
    Araport:AT2G26050
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T19L18.14; T19L18_14
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (11098652..11099380, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene F-box/RNI-like/FBD-like domains-containing protein Neighboring gene PYR1-like 2 Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene protein REVERSION-TO-ETHYLENE SENSITIVITY-like protein (DUF778)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF1644)
    NP_180175.1
    • FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT1G80220.1); Has 274 Blast hits to 266 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 2; Plants - 257; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11098652..11099380 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128164.1 → NP_180175.1  hypothetical protein (DUF1644) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180175.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W0A4, A0A5S9X1G9, O80991
      Conserved Domains (1) summary
      pfam07800
      Location:39 → 153
      DUF1644; Protein of unknown function (DUF1644)
    Nucleotide Protein
    Heading Accession and Version

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