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    NUDT5 nudix hydrolase homolog 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814983, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NUDT5
    Official Full Name
    nudix hydrolase homolog 5
    Primary source
    TAIR:AT2G04430
    Locus tag
    AT2G04430
    See related
    Araport:AT2G04430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    atnudt5; nudix hydrolase homolog 5; T1O3.16; T1O3_16
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    Genomic context

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    See NUDT5 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Sequence:
    Chromosome: 2; NC_003071.7 (1538472..1541375)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Polynucleotidyl transferase, ribonuclease H-like superfamily protein Neighboring gene low-molecular-weight cysteine-rich 82 Neighboring gene MutT/nudix family protein Neighboring gene nudix hydrolase homolog 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comprehensive analysis of cytosolic Nudix hydrolases in Arabidopsis thaliana. Ogawa T, et al. J Biol Chem, 2005 Jul 1. PMID 15878881
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    NM_126476.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nudix hydrolase homolog 5
    NP_178524.2
    • nudix hydrolase homolog 5 (NUDT5); FUNCTIONS IN: hydrolase activity; LOCATED IN: cytosol; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 6 (TAIR:AT2G04450.1); Has 2931 Blast hits to 2929 proteins in 813 species: Archae - 33; Bacteria - 1829; Metazoa - 186; Fungi - 19; Plants - 157; Viruses - 14; Other Eukaryotes - 693 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      1538472..1541375
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335236.1 → NP_001324657.1  nudix hydrolase homolog 5 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNV9, A0A1P8B0R5, A0A5S9WX42
      Conserved Domains (2) summary
      pfam18290
      Location:11 → 91
      Nudix_hydro; Nudix hydrolase domain
      cl00447
      Location:104 → 238
      Nudix_Hydrolase; Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ ...

    2. NM_126476.3 → NP_178524.2  nudix hydrolase homolog 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178524.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IV87, Q6NNG2, Q9SJC6
      UniProtKB/TrEMBL
      A0A178VNV9
      Conserved Domains (1) summary
      cl00447
      Location:123 → 257
      Nudix_Hydrolase; Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SJC6.3

    Gene LinkOut

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