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    hypothetical protein (DUF789) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814653, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF789)
    Primary source
    TAIR:AT2G01260
    Locus tag
    AT2G01260
    See related
    Araport:AT2G01260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10A8.14; F10A8_14
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (135223..137916, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene reticulon-like protein B15 Neighboring gene Ribosomal protein L30/L7 family protein Neighboring gene quiescin-sulfhydryl oxidase 2 Neighboring gene RING/FYVE/PHD zinc finger superfamily protein Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    NM_001335046.1
    NM_126187.4
    NM_201662.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF789)
    NP_001318174.1
    • Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_565257.1
    • Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 265 Blast hits to 263 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_973391.1
    • Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      135223..137916 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126187.4 → NP_565257.1  hypothetical protein (DUF789) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565257.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VS68, A0A654EQY0, Q9ZU41
      Conserved Domains (1) summary
      pfam05623
      Location:64 → 366
      DUF789; Protein of unknown function (DUF789)

    2. NM_001335046.1 → NP_001318174.1  hypothetical protein (DUF789) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VRY3, F4IN81

    3. NM_201662.3 → NP_973391.1  hypothetical protein (DUF789) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973391.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VS68, F4IN82
      Conserved Domains (1) summary
      pfam05623
      Location:64 → 296
      DUF789; Protein of unknown function (DUF789)
    Nucleotide Protein
    Heading Accession and Version

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