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    LOC8084555 probable galacturonosyltransferase 7 [ Sorghum bicolor (sorghum) ]

    Gene ID: 8084555, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC8084555
    Gene description
    probable galacturonosyltransferase 7
    Locus tag
    SORBI_3001G384200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sorghum bicolor
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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    Genomic context

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    See LOC8084555 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 1 NC_012870.2 (67162640..67168052)

    Chromosome 1 - NC_012870.2Genomic Context describing neighboring genes Neighboring gene serine/arginine repetitive matrix protein 1 Neighboring gene 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Neighboring gene protein PHOSPHATE STARVATION RESPONSE 1-like Neighboring gene probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012870.2 Chromosome 1 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable galacturonosyltransferase 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Genomic

    1. NC_012870.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

      Range
      67162640..67168052
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002465278.2 → XP_002465323.1  probable galacturonosyltransferase 7

      See identical proteins and their annotated locations for XP_002465323.1

      UniProtKB/TrEMBL
      A0A921V119, C5X1N7
      Conserved Domains (1) summary
      PLN02769
      Location:1 → 627
      PLN02769; Probable galacturonosyltransferase
    Nucleotide Protein
    Heading Accession and Version

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