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    LOC8068976 probable starch synthase 4, chloroplastic/amyloplastic [ Sorghum bicolor (sorghum) ]

    Gene ID: 8068976, updated on 18-Sep-2024

    Summary

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    Gene symbol
    LOC8068976
    Gene description
    probable starch synthase 4, chloroplastic/amyloplastic
    Locus tag
    SORBI_3009G209300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sorghum bicolor
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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    Genomic context

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    See LOC8068976 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 9 NC_012878.2 (55614043..55622105)

    Chromosome 9 - NC_012878.2Genomic Context describing neighboring genes Neighboring gene RGG repeats nuclear RNA binding protein A Neighboring gene probable serine acetyltransferase 5 Neighboring gene E3 ubiquitin-protein ligase ATL31 Neighboring gene uncharacterized LOC110430351 Neighboring gene putative F-box protein At4g38870

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012878.2 Chromosome 9 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable starch synthase 4, chloroplastic/amyloplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Genomic

    1. NC_012878.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

      Range
      55614043..55622105
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021447702.1 → XP_021303377.1  probable starch synthase 4, chloroplastic/amyloplastic isoform X2

      Conserved Domains (1) summary
      PLN02939
      Location:17 → 898
      PLN02939; transferase, transferring glycosyl groups

    2. XM_002440083.2 → XP_002440128.1  probable starch synthase 4, chloroplastic/amyloplastic isoform X1

      See identical proteins and their annotated locations for XP_002440128.1

      UniProtKB/TrEMBL
      A0A921QBN2, C5YUG2
      Conserved Domains (1) summary
      PLN02939
      Location:17 → 899
      PLN02939; transferase, transferring glycosyl groups

    RNA

    1. XR_002447617.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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