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    CEH00_RS21505 plasmid partitioning protein RepB C-terminal domain-containing protein [ Shigella boydii ]

    Gene ID: 75205886, updated on 3-Dec-2024

    Summary

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    Gene symbol
    CEH00_RS21505
    Gene description
    plasmid partitioning protein RepB C-terminal domain-containing protein
    Locus tag
    CEH00_RS21505
    Gene type
    protein coding
    Organism
    Shigella boydii (strain: ESBL-W3-2, nat-host: Homo sapiens)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
    Old locus tag
    CEH00_21525
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    Genomic context

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    NZ_NIYS01000132.1Genomic Context describing neighboring genes Neighboring gene integrase domain-containing protein Neighboring gene recombinase family protein Neighboring gene ParB/RepB/Spo0J family partition protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_NIYS01000132.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The replicator of the nopaline-type Ti plasmid pTiC58 is a member of the repABC family and is influenced by the TraR-dependent quorum-sensing regulatory system. Li PL, et al. J Bacteriol, 2000 Jan. PMID 10613878, Free PMC Article
    2. Novel structural difference between nopaline- and octopine-type trbJ genes: construction of genetic and physical map and sequencing of trb/traI and rep gene clusters of a new Ti plasmid pTi-SAKURA. Suzuki K, et al. Biochim Biophys Acta, 1998 Mar 4. PMID 9524202

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    plasmid partitioning protein RepB C-terminal domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_NIYS01000132.1 Reference assembly

      Range
      29371..30267
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_000614784.1 MULTISPECIES: plasmid partitioning protein RepB C-terminal domain-containing protein [Enterobacteriaceae]

      See identical proteins and their annotated locations for WP_000614784.1

      UniProtKB/TrEMBL
      A0A140N8R3, A0A1V3VUF2, A0A9Q5XWZ8, A0AAJ3NX26
      Conserved Domains (2) summary
      pfam07506
      Location:97 → 270
      RepB; RepB plasmid partitioning protein
      cl28891
      Location:12 → 85
      ParB_N_Srx; ParB N-terminal domain and sulfiredoxin protein-related families
    Nucleotide Protein
    Heading Accession and Version