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    lpfA-O113 long polar fimbria major subunit LpfA-O113 [ Shigella boydii ]

    Gene ID: 75205446, updated on 3-Dec-2024

    Summary

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    Gene symbol
    lpfA-O113
    Gene description
    long polar fimbria major subunit LpfA-O113
    Locus tag
    CEH00_RS19105
    Gene type
    protein coding
    Organism
    Shigella boydii (strain: ESBL-W3-2, nat-host: Homo sapiens)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
    Old locus tag
    CEH00_19130
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    Genomic context

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    NZ_NIYS01000119.1Genomic Context describing neighboring genes Neighboring gene long polar fimbrial usher protein LpfC-O113 Neighboring gene long polar fimbrial chaperone LpfB-O113 Neighboring gene glutamine--fructose-6-phosphate transaminase (isomerizing) Neighboring gene bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_NIYS01000119.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Virulence profile comparison between LEE-negative Shiga toxin-producing Escherichia coli (STEC) strains isolated from cattle and humans. Galli L, et al. Vet Microbiol, 2010 Jul 14. PMID 20022185
    2. Identification of a novel fimbrial gene cluster related to long polar fimbriae in locus of enterocyte effacement-negative strains of enterohemorrhagic Escherichia coli. Doughty S, et al. Infect Immun, 2002 Dec. PMID 12438351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    long polar fimbria major subunit LpfA-O113

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_NIYS01000119.1 Reference assembly

      Range
      79518..80090 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_000827806.1 MULTISPECIES: long polar fimbria major subunit LpfA-O113 [Enterobacterales]

      See identical proteins and their annotated locations for WP_000827806.1

      UniProtKB/TrEMBL
      A0A2A2XS46, A0A2S8DIQ3, A0A6H2GLA7, A0A7Z1ENK7, A0A836ZBZ3, A0A8E0FM47, A0A979H3S9, A0A9P2MNW2, A0AA35AQM5, A0AAD2V8P9, A0AAD2ZD69, A0AAN1S9U4, A0AAN3M8D9, A0AAP9MNY4, A7ZTT9, B2TUP7, E0J2Z8, M1RGC4, M1RMD6, M1RTN5, M1S1P3, M1S1R9, Q3YVM5, Q6DVP6, Q8VPB9, W1F3Y2
      Conserved Domains (1) summary
      PRK15289
      Location:1 → 190
      lpfA; fimbrial protein; Provisional
    Nucleotide Protein
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