U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC7477225 multiple organellar RNA editing factor 3, mitochondrial [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 7477225, updated on 23-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC7477225
    Gene description
    multiple organellar RNA editing factor 3, mitochondrial
    Locus tag
    POPTR_010G007200v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC7477225 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 10 NC_037294.2 (683103..685645, complement)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 10 NC_037294.1 (679426..681859, complement)

    Chromosome 10 - NC_037294.2Genomic Context describing neighboring genes Neighboring gene ethylene-responsive transcription factor RAP2-3 Neighboring gene uncharacterized LOC7477224 Neighboring gene uncharacterized LOC112326240 Neighboring gene exopolygalacturonase

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding. Ralph SG, et al. BMC Genomics, 2008 Jan 29. PMID 18230180, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cytidine to uridine editing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial mRNA modification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    multiple organellar RNA editing factor 3, mitochondrial

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037294.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      683103..685645 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002315456.4 → XP_002315492.2  multiple organellar RNA editing factor 3, mitochondrial

      See identical proteins and their annotated locations for XP_002315492.2

      UniProtKB/TrEMBL
      A9PBE7, B9HXF5
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials