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    LOC7454876 hydroxymethylglutaryl-CoA lyase, mitochondrial [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 7454876, updated on 11-Apr-2024

    Summary

    Gene symbol
    LOC7454876
    Gene description
    hydroxymethylglutaryl-CoA lyase, mitochondrial
    Locus tag
    POPTR_009G068600v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

    See LOC7454876 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 9 NC_037293.2 (6809840..6815419)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 9 NC_037293.1 (6805091..6810645)

    Chromosome 9 - NC_037293.2Genomic Context describing neighboring genes Neighboring gene Holliday junction resolvase MOC1, chloroplastic Neighboring gene uncharacterized LOC7454877 Neighboring gene 10 kDa chaperonin, mitochondrial Neighboring gene uncharacterized LOC7454875

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydroxymethylglutaryl-CoA lyase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in L-leucine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in ketone body biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    hydroxymethylglutaryl-CoA lyase, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037293.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      6809840..6815419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002313970.4XP_002314006.1  hydroxymethylglutaryl-CoA lyase, mitochondrial

      See identical proteins and their annotated locations for XP_002314006.1

      UniProtKB/TrEMBL
      B9HNI0
      Conserved Domains (1) summary
      PLN02746
      Location:84429
      PLN02746; hydroxymethylglutaryl-CoA lyase
    2. XM_006379050.3XP_006379112.2  hydroxymethylglutaryl-CoA lyase, mitochondrial

      UniProtKB/TrEMBL
      B9HNI0
      Conserved Domains (1) summary
      PLN02746
      Location:84429
      PLN02746; hydroxymethylglutaryl-CoA lyase