U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    ALIPUT_RS05560 thiamine pyrophosphate-dependent enzyme [ Alistipes putredinis DSM 17216 ]

    Gene ID: 73803097, updated on 31-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    ALIPUT_RS05560
    Gene description
    thiamine pyrophosphate-dependent enzyme
    Locus tag
    ALIPUT_RS05560
    Gene type
    protein coding
    Organism
    Alistipes putredinis DSM 17216 (strain: DSM 17216, nat-host: Homo sapiens, type-material: type strain of Bacteroides putredinis)
    Lineage
    Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes
    Old locus tag
    ALIPUT_02731
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help

    NZ_DS499577.1Genomic Context describing neighboring genes Neighboring gene pyridoxal phosphate-dependent aminotransferase Neighboring gene indolepyruvate oxidoreductase subunit beta Neighboring gene hypothetical protein Neighboring gene fibronectin type III domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_DS499577.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Crystal structure of the thiamin diphosphate-dependent enzyme pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at 2.3 A resolution. Arjunan P, et al. J Mol Biol, 1996 Mar 1. PMID 8604141

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    thiamine pyrophosphate-dependent enzyme

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_DS499577.1 Reference assembly

      Range
      1121838..1123436 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_040293246.1 MULTISPECIES: thiamine pyrophosphate-dependent enzyme [Alistipes]

      UniProtKB/TrEMBL
      A0A1Q6F2D6
      Conserved Domains (3) summary
      cd07034
      Location:9 → 167
      TPP_PYR_PFOR_IOR-alpha_like; Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins
      cd02008
      Location:347 → 520
      TPP_IOR_alpha; Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit. IOR catalyzes the oxidative decarboxylation of arylpyruvates, such as ...
      TIGR03336
      Location:3 → 530
      IOR_alpha; indolepyruvate ferredoxin oxidoreductase, alpha subunit

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases