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    PER1 period circadian regulator 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 721948, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PER1provided by VGNC
    Official Full Name
    period circadian regulator 1provided by VGNC
    Primary source
    VGNC:VGNC:75942
    See related
    Ensembl:ENSMMUG00000021798
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PER1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (7942485..7958479, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (8159591..8175578, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene vesicle associated membrane protein 2 Neighboring gene U8 small nucleolar RNA Neighboring gene transmembrane protein 107

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in circadian regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in entrainment of circadian clock by photoperiod IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    period circadian protein homolog 1
    Names
    period circadian clock 1
    period homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      7942485..7958479 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015118551.2 → XP_014974037.2  period circadian protein homolog 1 isoform X5

      UniProtKB/TrEMBL
      G7NII4, H9FVS1, I0FSK9
      Related
      ENSMMUP00000047996.2, ENSMMUT00000063830.2
      Conserved Domains (2) summary
      pfam12114
      Location:1083 → 1222
      Period_C; Period protein 2/3C-terminal region
      pfam08447
      Location:373 → 457
      PAS_3; PAS fold

    2. XM_028835989.1 → XP_028691822.1  period circadian protein homolog 1 isoform X3

      UniProtKB/TrEMBL
      G7NII4, I0FSK9
      Conserved Domains (2) summary
      pfam12114
      Location:1132 → 1271
      Period_C; Period protein 2/3C-terminal region
      pfam08447
      Location:422 → 506
      PAS_3; PAS fold

    3. XM_015118550.2 → XP_014974036.2  period circadian protein homolog 1 isoform X4

      UniProtKB/TrEMBL
      G7NII4, I0FSK9
      Conserved Domains (2) summary
      pfam12114
      Location:1100 → 1239
      Period_C; Period protein 2/3C-terminal region
      pfam08447
      Location:450 → 534
      PAS_3; PAS fold

    4. XM_028835988.1 → XP_028691821.1  period circadian protein homolog 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QIX4
      Conserved Domains (2) summary
      pfam12114
      Location:1160 → 1299
      Period_C; Period protein 2/3C-terminal region
      pfam08447
      Location:450 → 534
      PAS_3; PAS fold

    5. XM_015118549.2 → XP_014974035.2  period circadian protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      F7ESU2, G7NII4, I0FSK9
      Related
      ENSMMUP00000028711.4, ENSMMUT00000030676.4
      Conserved Domains (2) summary
      pfam12114
      Location:1160 → 1299
      Period_C; Period protein 2/3C-terminal region
      pfam08447
      Location:450 → 534
      PAS_3; PAS fold
    Nucleotide Protein
    Heading Accession and Version

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