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    LOC716890 regenerating islet-derived protein 3-alpha [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716890, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC716890
    Gene description
    regenerating islet-derived protein 3-alpha
    See related
    Ensembl:ENSMMUG00000062818
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
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    Genomic context

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    See LOC716890 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (29462363..29465100)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (80532806..80535543, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC114671925 Neighboring gene uncharacterized LOC114671924 Neighboring gene lithostathine-1-beta-like Neighboring gene lithostathine-1-alpha

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oligosaccharide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peptidoglycan binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in disruption of cell wall in another organism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to peptide hormone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in collagen-containing extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    regenerating islet-derived protein 3-alpha

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      29462363..29465100
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112728.1 → XP_014968214.1  regenerating islet-derived protein 3-alpha isoform X1

      UniProtKB/TrEMBL
      A0A5F8A9B3, G7NAG8
      Conserved Domains (1) summary
      cd03594
      Location:40 → 173
      CLECT_REG-1_like; C-type lectin-like domain (CTLD) of the type found in Human REG-1 (lithostathine), REG-4, and avian eggshell-specific proteins: ansocalcin, structhiocalcin-1(SCA-1), and -2(SCA-2)

    2. XM_015112729.1 → XP_014968215.1  regenerating islet-derived protein 3-alpha isoform X1

      UniProtKB/TrEMBL
      A0A5F8A9B3, G7NAG8
      Related
      ENSMMUP00000073514.1, ENSMMUT00000098431.1
      Conserved Domains (1) summary
      cd03594
      Location:40 → 173
      CLECT_REG-1_like; C-type lectin-like domain (CTLD) of the type found in Human REG-1 (lithostathine), REG-4, and avian eggshell-specific proteins: ansocalcin, structhiocalcin-1(SCA-1), and -2(SCA-2)

    3. XM_015112730.2 → XP_014968216.1  regenerating islet-derived protein 3-alpha isoform X2

      Conserved Domains (1) summary
      cl02432
      Location:40 → 127
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    Nucleotide Protein
    Heading Accession and Version

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