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    LRRC4C leucine rich repeat containing 4C [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716620, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LRRC4Cprovided by VGNC
    Official Full Name
    leucine rich repeat containing 4Cprovided by VGNC
    Primary source
    VGNC:VGNC:74391
    Locus tag
    EGK_06340
    See related
    Ensembl:ENSMMUG00000007945
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LRRC4C in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (24186228..25514521)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (24584896..25907670)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene protein LSM12 homolog pseudogene Neighboring gene 60S ribosomal protein L9 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC114672277 Neighboring gene zinc finger CCHC domain-containing protein 9 pseudogene Neighboring gene uncharacterized LOC106993257 Neighboring gene uncharacterized LOC114672278

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell-cell adhesion mediator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in modulation of chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of axonogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic membrane adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in glutamatergic synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic density membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat-containing protein 4C
    Names
    Netrin-G1 ligand

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      24186228..25514521
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833502.1 → XP_028689335.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    2. XM_028833503.1 → XP_028689336.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    3. XM_028833508.1 → XP_028689341.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    4. XM_028833501.1 → XP_028689334.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    5. XM_028833510.1 → XP_028689343.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    6. XM_028833512.1 → XP_028689345.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    7. XM_028833515.1 → XP_028689348.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    8. XM_028833517.1 → XP_028689350.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    9. XM_028833506.1 → XP_028689339.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    10. XM_028833514.1 → XP_028689347.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    11. XM_028833516.1 → XP_028689349.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    12. XM_015114429.2 → XP_014969915.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    13. XM_028833507.1 → XP_028689340.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    14. XM_028833505.1 → XP_028689338.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    15. XM_028833518.1 → XP_028689351.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Related
      ENSMMUP00000072636.1, ENSMMUT00000096547.1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    16. XM_028833509.1 → XP_028689342.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    17. XM_028833513.1 → XP_028689346.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    18. XM_015114435.2 → XP_014969921.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Related
      ENSMMUP00000037102.1, ENSMMUT00000044096.3
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    19. XM_001114570.3 → XP_001114570.1  leucine-rich repeat-containing protein 4C

      See identical proteins and their annotated locations for XP_001114570.1

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    20. XM_028833504.1 → XP_028689337.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    21. XM_028833511.1 → XP_028689344.1  leucine-rich repeat-containing protein 4C

      UniProtKB/TrEMBL
      A0A8J8XWG8, F6T8E0, G7NDJ8, H9F1Q1
      Conserved Domains (6) summary
      smart00013
      Location:47 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:301 → 339
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:360 → 443
      IG; Immunoglobulin
      sd00033
      Location:78 → 101
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:220 → 279
      LRR_8; Leucine rich repeat
      cd21340
      Location:65 → 235
      PPP1R42; protein phosphatase 1 regulatory subunit 42
    Nucleotide Protein
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