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    DDIT4 DNA damage inducible transcript 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715307, updated on 5-Mar-2024

    Summary

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    Gene symbol
    DDIT4
    Gene description
    DNA damage inducible transcript 4
    Locus tag
    EGK_19745
    See related
    Ensembl:ENSMMUG00000055226
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DDIT4 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (65504516..65506615, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (60096563..60098665, complement)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene mitochondrial calcium uptake 1 Neighboring gene U6 spliceosomal RNA Neighboring gene DnaJ heat shock protein family (Hsp40) member B12 Neighboring gene anaphase promoting complex subunit 16 Neighboring gene 60S ribosomal protein L15 pseudogene Neighboring gene uncharacterized LOC114669973 Neighboring gene activating signal cointegrator 1 complex subunit 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Form deprivation modulates retinal neurogenesis in primate experimental myopia. Tkatchenko AV, et al. Proc Natl Acad Sci U S A, 2006 Mar 21. PMID 16537371, Free PMC Article
    2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 14-3-3 protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of TOR signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA damage-inducible transcript 4 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257796.1 → NP_001244725.1  DNA damage-inducible transcript 4 protein

      See identical proteins and their annotated locations for NP_001244725.1

      Status: PROVISIONAL

      Source sequence(s)
      JU335091
      UniProtKB/TrEMBL
      A0A8J8XRK8, F7DLT7, G7N274, H9ZAD1
      Related
      ENSMMUP00000072895.1, ENSMMUT00000083713.1
      Conserved Domains (1) summary
      pfam07809
      Location:105 → 224
      RTP801_C; RTP801 C-terminal region

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      65504516..65506615 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015147370.2 → XP_015002856.1  DNA damage-inducible transcript 4 protein isoform X1

      UniProtKB/TrEMBL
      A0A8J8XRK8, F7DLT7, G7N274, H9ZAD1
      Conserved Domains (1) summary
      pfam07809
      Location:105 → 224
      RTP801_C; RTP801 C-terminal region
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials