U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    RNF170 ring finger protein 170 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712606, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RNF170provided by VGNC
    Official Full Name
    ring finger protein 170provided by VGNC
    Primary source
    VGNC:VGNC:76818
    Locus tag
    EGK_18899
    See related
    Ensembl:ENSMMUG00000028999
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RNF170 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (43469148..43515170, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (41776359..41822410)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene cholinergic receptor nicotinic alpha 6 subunit Neighboring gene THAP domain containing 1 Neighboring gene hook microtubule tethering protein 3 Neighboring gene uncharacterized LOC114680240 Neighboring gene U1 spliceosomal RNA Neighboring gene farnesyltransferase, CAAX box, subunit alpha

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    E3 ubiquitin-protein ligase RNF170
    Names
    Putative LAG1-interacting protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      43469148..43515170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015145267.2 → XP_015000753.1  E3 ubiquitin-protein ligase RNF170 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AQV3, A0A5K1UG12, A0A8J8Y552, F6SN32, F7GTH7, G7MZ83
      Related
      ENSMMUP00000079447.1, ENSMMUT00000087045.1
      Conserved Domains (2) summary
      cd16553
      Location:87 → 130
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:203 → 239
      DUF1232; Protein of unknown function (DUF1232)

    2. XM_028852640.1 → XP_028708473.1  E3 ubiquitin-protein ligase RNF170 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AQV3, A0A5K1UG12, A0A8J8Y552, F6SN32, F7GTH7, G7MZ83
      Conserved Domains (2) summary
      cd16553
      Location:87 → 130
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:203 → 239
      DUF1232; Protein of unknown function (DUF1232)

    3. XM_028852641.1 → XP_028708474.1  E3 ubiquitin-protein ligase RNF170 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AQV3, A0A5K1UG12, A0A8J8Y552, F6SN32, F7GTH7, G7MZ83
      Related
      ENSMMUP00000026119.4, ENSMMUT00000027917.4
      Conserved Domains (2) summary
      cd16553
      Location:87 → 130
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:203 → 239
      DUF1232; Protein of unknown function (DUF1232)

    4. XM_015145270.2 → XP_015000756.1  E3 ubiquitin-protein ligase RNF170 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AQV3, A0A5K1UG12, A0A8J8Y552, F6SN32, F7GTH7, G7MZ83
      Related
      ENSMMUP00000032121.3, ENSMMUT00000039039.3
      Conserved Domains (2) summary
      cd16553
      Location:87 → 130
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:203 → 239
      DUF1232; Protein of unknown function (DUF1232)

    5. XM_015145269.2 → XP_015000755.1  E3 ubiquitin-protein ligase RNF170 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AQV3, A0A5K1UG12, A0A8J8Y552, F6SN32, F7GTH7, G7MZ83
      Conserved Domains (2) summary
      cd16553
      Location:87 → 130
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:203 → 239
      DUF1232; Protein of unknown function (DUF1232)

    6. XM_015145272.2 → XP_015000758.1  E3 ubiquitin-protein ligase RNF170 isoform X2

      Conserved Domains (2) summary
      cd16553
      Location:3 → 46
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:119 → 155
      DUF1232; Protein of unknown function (DUF1232)

    7. XM_028852642.1 → XP_028708475.1  E3 ubiquitin-protein ligase RNF170 isoform X2

      Conserved Domains (2) summary
      cd16553
      Location:3 → 46
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:119 → 155
      DUF1232; Protein of unknown function (DUF1232)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.