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    VPS72 vacuolar protein sorting 72 homolog [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709818, updated on 17-Aug-2024

    Summary

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    Official Symbol
    VPS72provided by VGNC
    Official Full Name
    vacuolar protein sorting 72 homologprovided by VGNC
    Primary source
    VGNC:VGNC:78560
    See related
    Ensembl:ENSMMUG00000007905
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See VPS72 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (99919127..99935346)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (125668916..125685743, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene proteasome 26S subunit ubiquitin receptor, non-ATPase 4 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 alpha Neighboring gene tropomodulin 4 Neighboring gene sodium channel modifier 1 Neighboring gene LysM domain containing 1 Neighboring gene TNF alpha induced protein 8 like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP-dependent H2AZ histone chaperone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vacuolar protein sorting-associated protein 72 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266143.1 → NP_001253072.1  vacuolar protein sorting-associated protein 72 homolog

      See identical proteins and their annotated locations for NP_001253072.1

      Status: PROVISIONAL

      Source sequence(s)
      JV048077
      UniProtKB/TrEMBL
      G7MDK0, I0FUM2
      Related
      ENSMMUP00000062972.1, ENSMMUT00000091131.1
      Conserved Domains (2) summary
      pfam05764
      Location:7 → 216
      YL1; YL1 nuclear protein
      pfam08265
      Location:291 → 319
      YL1_C; YL1 nuclear protein C-terminal domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      99919127..99935346
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028843760.1 → XP_028699593.1  vacuolar protein sorting-associated protein 72 homolog isoform X1

      UniProtKB/TrEMBL
      G7MDK0
      Conserved Domains (2) summary
      pfam08265
      Location:232 → 260
      YL1_C; YL1 nuclear protein C-terminal domain
      pfam05764
      Location:7 → 115
      YL1; YL1 nuclear protein

    2. XM_015150814.2 → XP_015006300.1  vacuolar protein sorting-associated protein 72 homolog isoform X2

      UniProtKB/TrEMBL
      F7CW49
      Related
      ENSMMUP00000039089.2, ENSMMUT00000046048.3
      Conserved Domains (2) summary
      pfam04180
      Location:22 → 78
      LTV; Low temperature viability protein
      pfam05764
      Location:6 → 187
      YL1; YL1 nuclear protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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