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    IHO1 interactor of HORMAD1 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707136, updated on 17-Aug-2024

    Summary

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    Official Symbol
    IHO1provided by VGNC
    Official Full Name
    interactor of HORMAD1 1provided by VGNC
    Primary source
    VGNC:VGNC:110359
    See related
    Ensembl:ENSMMUG00000053526
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    CCDC36
    Orthologs
    human mouse all
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    Genomic context

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    See IHO1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (105278808..105342934)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (93114631..93180134, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene kelch domain containing 8B Neighboring gene cytochrome c oxidase subunit 6A1, mitochondrial pseudogene Neighboring gene chromosome 2 C3orf84 homolog Neighboring gene chromosome 2 C3orf62 homolog Neighboring gene ubiquitin specific peptidase 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homologous chromosome pairing at meiosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in meiotic DNA double-strand break formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in condensed nuclear chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    interactor of HORMAD1 protein 1
    Names
    coiled-coil domain containing 36

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      105278808..105342934
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130915.2 → XP_014986401.1  interactor of HORMAD1 protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Conserved Domains (1) summary
      pfam15771
      Location:19 → 609
      DUF4700; Domain of unknown function (DUF4700)

    2. XM_002802780.3 → XP_002802826.1  interactor of HORMAD1 protein 1 isoform X4

      See identical proteins and their annotated locations for XP_002802826.1

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Related
      ENSMMUP00000073828.1, ENSMMUT00000105411.1
      Conserved Domains (1) summary
      pfam15771
      Location:19 → 596
      DUF4700; Domain of unknown function (DUF4700)

    3. XM_015130918.2 → XP_014986404.1  interactor of HORMAD1 protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Conserved Domains (1) summary
      pfam15771
      Location:19 → 607
      DUF4700; Domain of unknown function (DUF4700)

    4. XM_015130919.1 → XP_014986405.1  interactor of HORMAD1 protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Conserved Domains (1) summary
      pfam15771
      Location:15 → 604
      DUF4700; Domain of unknown function (DUF4700)

    5. XM_015130916.1 → XP_014986402.1  interactor of HORMAD1 protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Conserved Domains (1) summary
      pfam15771
      Location:19 → 609
      DUF4700; Domain of unknown function (DUF4700)

    6. XM_015130917.2 → XP_014986403.1  interactor of HORMAD1 protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Conserved Domains (1) summary
      pfam15771
      Location:19 → 609
      DUF4700; Domain of unknown function (DUF4700)

    7. XM_015130920.2 → XP_014986406.1  interactor of HORMAD1 protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Conserved Domains (1) summary
      pfam15771
      Location:15 → 604
      DUF4700; Domain of unknown function (DUF4700)
    Nucleotide Protein
    Heading Accession and Version

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