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    SLC47A1 solute carrier family 47 member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703544, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC47A1provided by VGNC
    Official Full Name
    solute carrier family 47 member 1provided by VGNC
    Primary source
    VGNC:VGNC:77774
    See related
    Ensembl:ENSMMUG00000002700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See SLC47A1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (19025003..19071210)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (19337951..19385021)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene multidrug and toxin extrusion protein 2-like Neighboring gene uncharacterized LOC106993919 Neighboring gene aldehyde dehydrogenase 3 family member A2 Neighboring gene small nucleolar RNA SNORA31

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables xenobiotic transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in organic cation transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in xenobiotic detoxification by transmembrane export across the plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    multidrug and toxin extrusion protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      19025003..19071210
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015118789.2 → XP_014974275.1  multidrug and toxin extrusion protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RL11, G7NGG5
      Related
      ENSMMUP00000061006.2, ENSMMUT00000060198.2
      Conserved Domains (2) summary
      COG0534
      Location:31 → 464
      NorM; Na+-driven multidrug efflux pump [Defense mechanisms]
      cd13132
      Location:34 → 468
      MATE_eukaryotic; Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family

    2. XM_015118791.2 → XP_014974277.1  multidrug and toxin extrusion protein 1 isoform X3

      Conserved Domains (2) summary
      cd13132
      Location:34 → 437
      MATE_eukaryotic; Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family
      TIGR00797
      Location:44 → 383
      matE; putative efflux protein, MATE family

    3. XM_028836102.1 → XP_028691935.1  multidrug and toxin extrusion protein 1 isoform X2

      UniProtKB/TrEMBL
      G7NGG5
      Conserved Domains (1) summary
      cd13132
      Location:9 → 431
      MATE_eukaryotic; Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family
    Nucleotide Protein
    Heading Accession and Version

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