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    CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701698, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CPLANE1provided by VGNC
    Official Full Name
    ciliogenesis and planar polarity effector complex subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:71578
    See related
    Ensembl:ENSMMUG00000022166
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C6H5orf42
    Orthologs
    human mouse all
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    Genomic context

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    See CPLANE1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    54
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (36934797..37097765, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (37492109..37655993, complement)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene prothymosin alpha-like Neighboring gene 40S ribosomal protein S4, X isoform-like Neighboring gene uncharacterized LOC114678769 Neighboring gene oral-facial-digital syndrome 1 protein pseudogene Neighboring gene small nuclear ribonucleoprotein G pseudogene Neighboring gene nucleoporin 155 Neighboring gene U7 small nuclear RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ciliary transition zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ciliogenesis and planar polarity effector 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      36934797..37097765 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028849389.1 → XP_028705222.1  ciliogenesis and planar polarity effector 1 isoform X9

      UniProtKB/TrEMBL
      A0A5F8ANH1
      Related
      ENSMMUP00000078608.1, ENSMMUT00000099446.1
      Conserved Domains (1) summary
      pfam15392
      Location:2795 → 3142
      Joubert; Joubert syndrome-associated

    2. XM_015139885.2 → XP_014995371.1  ciliogenesis and planar polarity effector 1 isoform X8

      UniProtKB/TrEMBL
      A0A5F8ABH9, A0A5F8ANH1
      Related
      ENSMMUP00000074737.1, ENSMMUT00000091688.1
      Conserved Domains (1) summary
      pfam15392
      Location:2850 → 3198
      Joubert; Joubert syndrome-associated

    3. XM_015139881.2 → XP_014995367.1  ciliogenesis and planar polarity effector 1 isoform X4

      UniProtKB/TrEMBL
      A0A5F8A9B0
      Conserved Domains (1) summary
      pfam15392
      Location:2906 → 3254
      Joubert; Joubert syndrome-associated

    4. XM_015139879.2 → XP_014995365.1  ciliogenesis and planar polarity effector 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F8A9B0
      Conserved Domains (1) summary
      pfam15392
      Location:2907 → 3255
      Joubert; Joubert syndrome-associated

    5. XM_015139880.2 → XP_014995366.1  ciliogenesis and planar polarity effector 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8A9B0
      Conserved Domains (1) summary
      pfam15392
      Location:2907 → 3255
      Joubert; Joubert syndrome-associated

    6. XM_028849390.1 → XP_028705223.1  ciliogenesis and planar polarity effector 1 isoform X10

      UniProtKB/TrEMBL
      A0A5F8A9B0
      Conserved Domains (1) summary
      pfam15392
      Location:2651 → 2998
      Joubert; Joubert syndrome-associated

    7. XM_015139882.2 → XP_014995368.1  ciliogenesis and planar polarity effector 1 isoform X5

      UniProtKB/TrEMBL
      A0A5F8A9B0
      Conserved Domains (1) summary
      pfam15392
      Location:2894 → 3242
      Joubert; Joubert syndrome-associated

    8. XM_015139878.2 → XP_014995364.1  ciliogenesis and planar polarity effector 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QDH5, A0A5F8A9B0
      Related
      ENSMMUP00000046094.1, ENSMMUT00000064914.2
      Conserved Domains (1) summary
      pfam15392
      Location:2908 → 3256
      Joubert; Joubert syndrome-associated

    9. XM_015139887.2 → XP_014995373.1  ciliogenesis and planar polarity effector 1 isoform X11

      UniProtKB/TrEMBL
      A0A5F7ZAB8
      Conserved Domains (1) summary
      pfam15392
      Location:2513 → 2861
      Joubert; Joubert syndrome-associated

    10. XM_015139884.2 → XP_014995370.1  ciliogenesis and planar polarity effector 1 isoform X7

      UniProtKB/TrEMBL
      A0A5F8A9B0
      Conserved Domains (1) summary
      pfam15392
      Location:2857 → 3205
      Joubert; Joubert syndrome-associated

    11. XM_015139883.2 → XP_014995369.1  ciliogenesis and planar polarity effector 1 isoform X6

      UniProtKB/TrEMBL
      A0A5F8A9B0, F6XIM4
      Related
      ENSMMUP00000029180.4, ENSMMUT00000031177.4
      Conserved Domains (1) summary
      pfam15392
      Location:2858 → 3206
      Joubert; Joubert syndrome-associated

    RNA

    1. XR_003730286.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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